Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h1Q4VGL6 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h1Q4VGL6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rc3h1Q4VGL6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Gm24841-201ENSMUST00000158676 357 ntBASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rc3h1Q4VGL6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rc3h1Q4VGL6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rc3h1Q4VGL6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rc3h1Q4VGL6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rc3h1Q4VGL6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rc3h1Q4VGL6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rc3h1Q4VGL6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.38■□□□□ 0.85
Rc3h1Q4VGL6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rc3h1Q4VGL6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rc3h1Q4VGL6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.36■□□□□ 0.85
Rc3h1Q4VGL6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rc3h1Q4VGL6 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.36■□□□□ 0.85
Rc3h1Q4VGL6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.36■□□□□ 0.85
Rc3h1Q4VGL6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rc3h1Q4VGL6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms