Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.59□□□□□ -0.71
Herc2Q4U2R1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.59□□□□□ -0.71
Herc2Q4U2R1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Herc2Q4U2R1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.59□□□□□ -0.71
Herc2Q4U2R1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc2Q4U2R1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Gm27867-201ENSMUST00000184778 125 ntBASIC10.58□□□□□ -0.72
Herc2Q4U2R1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc2Q4U2R1 Gm5540-201ENSMUST00000131852 1848 ntBASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Gm13401-201ENSMUST00000117074 291 ntBASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC10.57□□□□□ -0.72
Herc2Q4U2R1 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Gm20949-201ENSMUST00000206478 952 ntBASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc2Q4U2R1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Gm13616-201ENSMUST00000120600 222 ntBASIC10.56□□□□□ -0.72
Herc2Q4U2R1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 AA543401-201ENSMUST00000164248 1269 ntBASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc2Q4U2R1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Herc2Q4U2R1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Herc2Q4U2R1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms