Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lin28bQ45KJ6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lin28bQ45KJ6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin28bQ45KJ6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin28bQ45KJ6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Gm38027-201ENSMUST00000192315 235 ntBASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.73■□□□□ 0.27
Lin28bQ45KJ6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Tgds-204ENSMUST00000228543 1594 ntBASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Gm4974-201ENSMUST00000209974 875 ntBASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lin28bQ45KJ6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lin28bQ45KJ6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lin28bQ45KJ6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lin28bQ45KJ6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms