Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nlrc4Q3UP24 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Gm715-201ENSMUST00000117865 831 ntBASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nlrc4Q3UP24 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nlrc4Q3UP24 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Gm10517-202ENSMUST00000192970 758 ntBASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nlrc4Q3UP24 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Gm10252-201ENSMUST00000209541 832 ntBASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Nlrc4Q3UP24 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.53■□□□□ 0.56
Nlrc4Q3UP24 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Mir8112-201ENSMUST00000184382 131 ntBASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nlrc4Q3UP24 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nlrc4Q3UP24 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nlrc4Q3UP24 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nlrc4Q3UP24 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nlrc4Q3UP24 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms