Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Gm12085-201ENSMUST00000119263 940 ntBASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Naf1Q3UMQ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Naf1Q3UMQ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Naf1Q3UMQ8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.89■□□□□ 0.46
Naf1Q3UMQ8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Naf1Q3UMQ8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Gm4974-201ENSMUST00000209974 875 ntBASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Naf1Q3UMQ8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Naf1Q3UMQ8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms