Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Gm29791-202ENSMUST00000207888 369 ntBASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf44Q3UHJ8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf44Q3UHJ8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Gm37292-201ENSMUST00000192062 758 ntBASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Gm10812-201ENSMUST00000099864 546 ntBASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf44Q3UHJ8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Gm43183-201ENSMUST00000200632 547 ntBASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf44Q3UHJ8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rnf44Q3UHJ8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rnf44Q3UHJ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf44Q3UHJ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf44Q3UHJ8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rnf44Q3UHJ8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Grk6-206ENSMUST00000224995 2971 ntBASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Idnk-204ENSMUST00000226010 1898 ntBASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf44Q3UHJ8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf44Q3UHJ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf44Q3UHJ8 Gm12382-201ENSMUST00000122005 922 ntBASIC17■□□□□ 0.31
Rnf44Q3UHJ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf44Q3UHJ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf44Q3UHJ8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms