Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.85■□□□□ 0.93
Rnf180Q3U827 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf180Q3U827 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Gm27321-201ENSMUST00000185021 205 ntBASIC20.84■□□□□ 0.93
Rnf180Q3U827 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf180Q3U827 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf180Q3U827 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf180Q3U827 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.83■□□□□ 0.93
Rnf180Q3U827 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf180Q3U827 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rnf180Q3U827 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf180Q3U827 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.82■□□□□ 0.92
Rnf180Q3U827 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.82■□□□□ 0.92
Rnf180Q3U827 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf180Q3U827 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.82■□□□□ 0.92
Rnf180Q3U827 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Gm44872-201ENSMUST00000207864 420 ntBASIC20.81■□□□□ 0.92
Rnf180Q3U827 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.81■□□□□ 0.92
Rnf180Q3U827 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf180Q3U827 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Rprl3-201ENSMUST00000157400 290 ntBASIC20.8■□□□□ 0.92
Rnf180Q3U827 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rnf180Q3U827 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rnf180Q3U827 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.79■□□□□ 0.92
Rnf180Q3U827 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf180Q3U827 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf180Q3U827 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf180Q3U827 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf180Q3U827 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf180Q3U827 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf180Q3U827 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf180Q3U827 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms