Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctdnep1Q3TP92 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Gm13158-201ENSMUST00000122007 736 ntBASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.41■□□□□ 0.86
Ctdnep1Q3TP92 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Gm10418-201ENSMUST00000100943 576 ntBASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctdnep1Q3TP92 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ctdnep1Q3TP92 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ctdnep1Q3TP92 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ctdnep1Q3TP92 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctdnep1Q3TP92 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctdnep1Q3TP92 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctdnep1Q3TP92 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.39■□□□□ 0.85
Ctdnep1Q3TP92 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctdnep1Q3TP92 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Gm11643-201ENSMUST00000119578 864 ntBASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctdnep1Q3TP92 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Gm42545-201ENSMUST00000202755 922 ntBASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Gm18025-201ENSMUST00000221733 862 ntBASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctdnep1Q3TP92 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctdnep1Q3TP92 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Gm6576-201ENSMUST00000169678 883 ntBASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Trmt13-210ENSMUST00000198454 880 ntBASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctdnep1Q3TP92 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms