Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna5Q2MKA5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna5Q2MKA5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna5Q2MKA5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Gm26039-201ENSMUST00000158152 144 ntBASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna5Q2MKA5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Gm18958-201ENSMUST00000174258 762 ntBASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna5Q2MKA5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Gm37025-201ENSMUST00000195159 829 ntBASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna5Q2MKA5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chrna5Q2MKA5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Golph3-205ENSMUST00000228671 2842 ntBASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Chrna5Q2MKA5 Gm38342-201ENSMUST00000195710 2980 ntBASIC21■□□□□ 0.95
Chrna5Q2MKA5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Gm11860-201ENSMUST00000122346 1010 ntBASIC21■□□□□ 0.95
Chrna5Q2MKA5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna5Q2MKA5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Gm24589-201ENSMUST00000116692 94 ntBASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Gm6623-201ENSMUST00000173570 544 ntBASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Gm27357-201ENSMUST00000183754 135 ntBASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna5Q2MKA5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Mir770-201ENSMUST00000103252 94 ntBASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Gm27742-201ENSMUST00000184667 60 ntBASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms