Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim72Q1XH17 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim72Q1XH17 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim72Q1XH17 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim72Q1XH17 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim72Q1XH17 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.83■□□□□ 0.6
Trim72Q1XH17 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.82■□□□□ 0.6
Trim72Q1XH17 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.82■□□□□ 0.6
Trim72Q1XH17 Gm20760-201ENSMUST00000179197 648 ntBASIC18.82■□□□□ 0.6
Trim72Q1XH17 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Mir8112-201ENSMUST00000184382 131 ntBASIC18.82■□□□□ 0.6
Trim72Q1XH17 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Gm18025-201ENSMUST00000221733 862 ntBASIC18.82■□□□□ 0.6
Trim72Q1XH17 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim72Q1XH17 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Gm13401-201ENSMUST00000117074 291 ntBASIC18.81■□□□□ 0.6
Trim72Q1XH17 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim72Q1XH17 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.81■□□□□ 0.6
Trim72Q1XH17 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim72Q1XH17 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim72Q1XH17 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.8■□□□□ 0.6
Trim72Q1XH17 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.8■□□□□ 0.6
Trim72Q1XH17 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.8■□□□□ 0.6
Trim72Q1XH17 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim72Q1XH17 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.79■□□□□ 0.6
Trim72Q1XH17 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Gm5643-201ENSMUST00000117081 966 ntBASIC18.79■□□□□ 0.6
Trim72Q1XH17 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim72Q1XH17 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms