Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smn1P97801 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smn1P97801 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smn1P97801 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.16■□□□□ 0.02
Smn1P97801 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.16■□□□□ 0.02
Smn1P97801 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smn1P97801 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smn1P97801 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.15■□□□□ 0.02
Smn1P97801 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Gm22325-201ENSMUST00000158904 308 ntBASIC15.15■□□□□ 0.02
Smn1P97801 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.15■□□□□ 0.02
Smn1P97801 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smn1P97801 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smn1P97801 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.14■□□□□ 0.01
Smn1P97801 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.14■□□□□ 0.01
Smn1P97801 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.14■□□□□ 0.01
Smn1P97801 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.14■□□□□ 0.01
Smn1P97801 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smn1P97801 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.14■□□□□ 0.01
Smn1P97801 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.14■□□□□ 0.01
Smn1P97801 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smn1P97801 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.13■□□□□ 0.01
Smn1P97801 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Smn1P97801 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.13■□□□□ 0.01
Smn1P97801 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smn1P97801 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.12■□□□□ 0.01
Smn1P97801 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smn1P97801 Gm13234-201ENSMUST00000120010 747 ntBASIC15.12■□□□□ 0.01
Smn1P97801 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.12■□□□□ 0.01
Smn1P97801 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smn1P97801 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.12■□□□□ 0.01
Smn1P97801 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smn1P97801 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.12■□□□□ 0.01
Smn1P97801 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smn1P97801 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smn1P97801 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Smn1P97801 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.11■□□□□ 0.01
Smn1P97801 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smn1P97801 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smn1P97801 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms