Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim43bP86448 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim43bP86448 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim43bP86448 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43bP86448 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim43bP86448 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim43bP86448 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.13■□□□□ 0.49
Trim43bP86448 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.13■□□□□ 0.49
Trim43bP86448 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim43bP86448 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43bP86448 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim43bP86448 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trim43bP86448 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trim43bP86448 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim43bP86448 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim43bP86448 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.12■□□□□ 0.49
Trim43bP86448 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43bP86448 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.12■□□□□ 0.49
Trim43bP86448 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim43bP86448 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim43bP86448 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim43bP86448 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim43bP86448 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim43bP86448 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim43bP86448 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim43bP86448 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.11■□□□□ 0.49
Trim43bP86448 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Trim43bP86448 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43bP86448 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim43bP86448 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Trim43bP86448 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim43bP86448 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43bP86448 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim43bP86448 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trim43bP86448 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim43bP86448 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Trim43bP86448 Gm20760-201ENSMUST00000179197 648 ntBASIC18.09■□□□□ 0.49
Trim43bP86448 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim43bP86448 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43bP86448 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim43bP86448 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms