Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
SgcaP82350 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.8□□□□□ -0.04
SgcaP82350 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SgcaP82350 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.8□□□□□ -0.04
SgcaP82350 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.8□□□□□ -0.04
SgcaP82350 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SgcaP82350 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgcaP82350 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.79□□□□□ -0.04
SgcaP82350 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SgcaP82350 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.79□□□□□ -0.04
SgcaP82350 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SgcaP82350 Gm12251-201ENSMUST00000117893 792 ntBASIC14.79□□□□□ -0.04
SgcaP82350 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.79□□□□□ -0.04
SgcaP82350 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
SgcaP82350 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SgcaP82350 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SgcaP82350 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgcaP82350 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SgcaP82350 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SgcaP82350 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgcaP82350 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SgcaP82350 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcaP82350 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcaP82350 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SgcaP82350 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgcaP82350 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.77□□□□□ -0.04
SgcaP82350 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcaP82350 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcaP82350 Smad6-203ENSMUST00000179458 273 ntBASIC14.77□□□□□ -0.05
SgcaP82350 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcaP82350 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcaP82350 Gm9847-201ENSMUST00000052528 599 ntBASIC14.77□□□□□ -0.05
SgcaP82350 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.77□□□□□ -0.05
SgcaP82350 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SgcaP82350 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SgcaP82350 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcaP82350 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SgcaP82350 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SgcaP82350 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcaP82350 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SgcaP82350 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SgcaP82350 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.76□□□□□ -0.05
SgcaP82350 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SgcaP82350 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SgcaP82350 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms