Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcbP82349 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SgcbP82349 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SgcbP82349 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SgcbP82349 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.74■□□□□ 0.11
SgcbP82349 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.74■□□□□ 0.11
SgcbP82349 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.74■□□□□ 0.11
SgcbP82349 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.74■□□□□ 0.11
SgcbP82349 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.74■□□□□ 0.11
SgcbP82349 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SgcbP82349 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.73■□□□□ 0.11
SgcbP82349 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SgcbP82349 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.73■□□□□ 0.11
SgcbP82349 Gm12382-201ENSMUST00000122005 922 ntBASIC15.73■□□□□ 0.11
SgcbP82349 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.73■□□□□ 0.11
SgcbP82349 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SgcbP82349 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SgcbP82349 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.72■□□□□ 0.11
SgcbP82349 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Gm10418-201ENSMUST00000100943 576 ntBASIC15.72■□□□□ 0.11
SgcbP82349 Gm43183-201ENSMUST00000200632 547 ntBASIC15.72■□□□□ 0.11
SgcbP82349 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.72■□□□□ 0.11
SgcbP82349 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SgcbP82349 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SgcbP82349 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Gm6576-201ENSMUST00000169678 883 ntBASIC15.71■□□□□ 0.11
SgcbP82349 Mir2861-201ENSMUST00000175539 82 ntBASIC15.71■□□□□ 0.11
SgcbP82349 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.71■□□□□ 0.11
SgcbP82349 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcbP82349 Fst-202ENSMUST00000223640 2612 ntBASIC15.71■□□□□ 0.11
SgcbP82349 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.71■□□□□ 0.11
SgcbP82349 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcbP82349 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcbP82349 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SgcbP82349 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SgcbP82349 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.7■□□□□ 0.1
SgcbP82349 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.7■□□□□ 0.1
SgcbP82349 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.7■□□□□ 0.1
SgcbP82349 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.7■□□□□ 0.1
SgcbP82349 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SgcbP82349 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.7■□□□□ 0.1
SgcbP82349 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcbP82349 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SgcbP82349 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.69■□□□□ 0.1
SgcbP82349 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.69■□□□□ 0.1
SgcbP82349 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms