Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atf1P81269 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.27■□□□□ 0.04
Atf1P81269 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.27■□□□□ 0.04
Atf1P81269 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Atf1P81269 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atf1P81269 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atf1P81269 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.27■□□□□ 0.03
Atf1P81269 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.26■□□□□ 0.03
Atf1P81269 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.26■□□□□ 0.03
Atf1P81269 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Atf1P81269 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.26■□□□□ 0.03
Atf1P81269 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atf1P81269 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.26■□□□□ 0.03
Atf1P81269 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Atf1P81269 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.25■□□□□ 0.03
Atf1P81269 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Atf1P81269 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atf1P81269 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.24■□□□□ 0.03
Atf1P81269 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
Atf1P81269 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Atf1P81269 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.24■□□□□ 0.03
Atf1P81269 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Atf1P81269 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.24■□□□□ 0.03
Atf1P81269 Gm29791-202ENSMUST00000207888 369 ntBASIC15.24■□□□□ 0.03
Atf1P81269 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.24■□□□□ 0.03
Atf1P81269 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.24■□□□□ 0.03
Atf1P81269 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atf1P81269 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms