Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Gm11249-201ENSMUST00000117071 859 ntBASIC14.68□□□□□ -0.06
Pdlim4P70271 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.68□□□□□ -0.06
Pdlim4P70271 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim4P70271 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.68□□□□□ -0.06
Pdlim4P70271 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Tgds-204ENSMUST00000228543 1594 ntBASIC14.68□□□□□ -0.06
Pdlim4P70271 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Fst-202ENSMUST00000223640 2612 ntBASIC14.67□□□□□ -0.06
Pdlim4P70271 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim4P70271 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.67□□□□□ -0.06
Pdlim4P70271 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.67□□□□□ -0.06
Pdlim4P70271 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.67□□□□□ -0.06
Pdlim4P70271 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pdlim4P70271 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.67□□□□□ -0.06
Pdlim4P70271 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim4P70271 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim4P70271 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim4P70271 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim4P70271 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim4P70271 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim4P70271 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.66□□□□□ -0.06
Pdlim4P70271 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.66□□□□□ -0.06
Pdlim4P70271 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim4P70271 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim4P70271 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Pdlim4P70271 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim4P70271 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim4P70271 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Gm13158-201ENSMUST00000122007 736 ntBASIC14.65□□□□□ -0.06
Pdlim4P70271 Gm27011-201ENSMUST00000182352 972 ntBASIC14.65□□□□□ -0.06
Pdlim4P70271 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim4P70271 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim4P70271 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim4P70271 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.65□□□□□ -0.06
Pdlim4P70271 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim4P70271 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Gm18666-201ENSMUST00000190039 958 ntBASIC14.64□□□□□ -0.07
Pdlim4P70271 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim4P70271 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pdlim4P70271 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim4P70271 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pdlim4P70271 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.63□□□□□ -0.07
Pdlim4P70271 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim4P70271 Mtag2-201ENSMUST00000058665 714 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms