Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.37■□□□□ 0.37
Traf6P70196 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.37■□□□□ 0.37
Traf6P70196 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Traf6P70196 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.36■□□□□ 0.37
Traf6P70196 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.36■□□□□ 0.37
Traf6P70196 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Gm6211-202ENSMUST00000167849 925 ntBASIC17.36■□□□□ 0.37
Traf6P70196 Gm29257-201ENSMUST00000186115 639 ntBASIC17.36■□□□□ 0.37
Traf6P70196 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Traf6P70196 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Gm13148-201ENSMUST00000118892 745 ntBASIC17.35■□□□□ 0.37
Traf6P70196 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.35■□□□□ 0.37
Traf6P70196 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.35■□□□□ 0.37
Traf6P70196 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Traf6P70196 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Traf6P70196 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Traf6P70196 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Traf6P70196 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Traf6P70196 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Traf6P70196 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Traf6P70196 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.34■□□□□ 0.37
Traf6P70196 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Traf6P70196 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Traf6P70196 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Traf6P70196 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.33■□□□□ 0.36
Traf6P70196 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.33■□□□□ 0.36
Traf6P70196 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Traf6P70196 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Traf6P70196 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.33■□□□□ 0.36
Traf6P70196 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Traf6P70196 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.32■□□□□ 0.36
Traf6P70196 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Traf6P70196 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.32■□□□□ 0.36
Traf6P70196 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.32■□□□□ 0.36
Traf6P70196 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Traf6P70196 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Traf6P70196 Gm10602-201ENSMUST00000098239 609 ntBASIC17.32■□□□□ 0.36
Traf6P70196 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Traf6P70196 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Traf6P70196 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.32■□□□□ 0.36
Traf6P70196 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Traf6P70196 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Traf6P70196 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Traf6P70196 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Traf6P70196 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms