Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six5P70178 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six5P70178 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six5P70178 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Six5P70178 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Six5P70178 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.51■□□□□ 0.23
Six5P70178 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.51■□□□□ 0.23
Six5P70178 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Six5P70178 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Six5P70178 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.51■□□□□ 0.23
Six5P70178 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six5P70178 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Six5P70178 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Six5P70178 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Gm5643-201ENSMUST00000117081 966 ntBASIC16.5■□□□□ 0.23
Six5P70178 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.5■□□□□ 0.23
Six5P70178 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.5■□□□□ 0.23
Six5P70178 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.5■□□□□ 0.23
Six5P70178 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.5■□□□□ 0.23
Six5P70178 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.5■□□□□ 0.23
Six5P70178 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Six5P70178 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Six5P70178 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six5P70178 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six5P70178 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.49■□□□□ 0.23
Six5P70178 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.49■□□□□ 0.23
Six5P70178 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six5P70178 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Six5P70178 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.48■□□□□ 0.23
Six5P70178 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Gm10653-202ENSMUST00000139570 835 ntBASIC16.48■□□□□ 0.23
Six5P70178 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.48■□□□□ 0.23
Six5P70178 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.48■□□□□ 0.23
Six5P70178 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.48■□□□□ 0.23
Six5P70178 Gm18025-201ENSMUST00000221733 862 ntBASIC16.48■□□□□ 0.23
Six5P70178 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.48■□□□□ 0.23
Six5P70178 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.48■□□□□ 0.23
Six5P70178 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six5P70178 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Six5P70178 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.47■□□□□ 0.23
Six5P70178 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Six5P70178 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Six5P70178 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.47■□□□□ 0.23
Six5P70178 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Six5P70178 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Six5P70178 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six5P70178 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Six5P70178 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Six5P70178 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms