Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.36■□□□□ 0.37
Lhx1P63006 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lhx1P63006 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.35■□□□□ 0.37
Lhx1P63006 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lhx1P63006 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx1P63006 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.34■□□□□ 0.37
Lhx1P63006 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.34■□□□□ 0.37
Lhx1P63006 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.34■□□□□ 0.37
Lhx1P63006 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Gm3375-201ENSMUST00000203929 796 ntBASIC17.34■□□□□ 0.37
Lhx1P63006 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.34■□□□□ 0.37
Lhx1P63006 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lhx1P63006 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx1P63006 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lhx1P63006 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lhx1P63006 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lhx1P63006 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lhx1P63006 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lhx1P63006 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lhx1P63006 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Lhx1P63006 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lhx1P63006 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.33■□□□□ 0.36
Lhx1P63006 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.33■□□□□ 0.36
Lhx1P63006 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lhx1P63006 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.33■□□□□ 0.36
Lhx1P63006 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.33■□□□□ 0.36
Lhx1P63006 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.33■□□□□ 0.36
Lhx1P63006 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx1P63006 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lhx1P63006 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.32■□□□□ 0.36
Lhx1P63006 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.32■□□□□ 0.36
Lhx1P63006 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.32■□□□□ 0.36
Lhx1P63006 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Lhx1P63006 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx1P63006 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lhx1P63006 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Lhx1P63006 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Lhx1P63006 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.31■□□□□ 0.36
Lhx1P63006 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.31■□□□□ 0.36
Lhx1P63006 Mir7071-201ENSMUST00000184847 69 ntBASIC17.31■□□□□ 0.36
Lhx1P63006 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.31■□□□□ 0.36
Lhx1P63006 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Lhx1P63006 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms