Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ybx1P62960 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ybx1P62960 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.09■□□□□ 0.49
Ybx1P62960 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ybx1P62960 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.09■□□□□ 0.49
Ybx1P62960 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ybx1P62960 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ybx1P62960 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ybx1P62960 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ybx1P62960 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Gm33142-201ENSMUST00000193913 867 ntBASIC18.08■□□□□ 0.48
Ybx1P62960 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.08■□□□□ 0.48
Ybx1P62960 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ybx1P62960 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ybx1P62960 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ybx1P62960 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.08■□□□□ 0.48
Ybx1P62960 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ybx1P62960 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.07■□□□□ 0.48
Ybx1P62960 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Gm13401-201ENSMUST00000117074 291 ntBASIC18.07■□□□□ 0.48
Ybx1P62960 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Gm22697-201ENSMUST00000175194 63 ntBASIC18.07■□□□□ 0.48
Ybx1P62960 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.07■□□□□ 0.48
Ybx1P62960 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ybx1P62960 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ybx1P62960 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.06■□□□□ 0.48
Ybx1P62960 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.06■□□□□ 0.48
Ybx1P62960 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.06■□□□□ 0.48
Ybx1P62960 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.06■□□□□ 0.48
Ybx1P62960 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ybx1P62960 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Ybx1P62960 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.05■□□□□ 0.48
Ybx1P62960 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.05■□□□□ 0.48
Ybx1P62960 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Gm18101-201ENSMUST00000215769 548 ntBASIC18.05■□□□□ 0.48
Ybx1P62960 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.05■□□□□ 0.48
Ybx1P62960 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.05■□□□□ 0.48
Ybx1P62960 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ybx1P62960 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ybx1P62960 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ybx1P62960 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.04■□□□□ 0.48
Ybx1P62960 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ybx1P62960 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms