Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.53■□□□□ 0.08
Sec61a1P61620 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sec61a1P61620 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sec61a1P61620 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sec61a1P61620 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.52■□□□□ 0.08
Sec61a1P61620 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Sec61a1P61620 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.52■□□□□ 0.08
Sec61a1P61620 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.52■□□□□ 0.08
Sec61a1P61620 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.52■□□□□ 0.08
Sec61a1P61620 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Sec61a1P61620 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.52■□□□□ 0.08
Sec61a1P61620 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sec61a1P61620 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.52■□□□□ 0.08
Sec61a1P61620 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a1P61620 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Sec61a1P61620 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Sec61a1P61620 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Sec61a1P61620 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sec61a1P61620 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a1P61620 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.51■□□□□ 0.07
Sec61a1P61620 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.51■□□□□ 0.07
Sec61a1P61620 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Sec61a1P61620 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Gm27011-201ENSMUST00000182352 972 ntBASIC15.51■□□□□ 0.07
Sec61a1P61620 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.51■□□□□ 0.07
Sec61a1P61620 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Sec61a1P61620 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.51■□□□□ 0.07
Sec61a1P61620 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sec61a1P61620 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a1P61620 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sec61a1P61620 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.5■□□□□ 0.07
Sec61a1P61620 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.5■□□□□ 0.07
Sec61a1P61620 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.5■□□□□ 0.07
Sec61a1P61620 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sec61a1P61620 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a1P61620 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sec61a1P61620 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sec61a1P61620 Gm7290-201ENSMUST00000104990 617 ntBASIC15.49■□□□□ 0.07
Sec61a1P61620 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms