Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.75■□□□□ 0.43
SmoP56726 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SmoP56726 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SmoP56726 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
SmoP56726 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.74■□□□□ 0.43
SmoP56726 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.74■□□□□ 0.43
SmoP56726 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.74■□□□□ 0.43
SmoP56726 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SmoP56726 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.74■□□□□ 0.43
SmoP56726 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SmoP56726 Grk6-206ENSMUST00000224995 2971 ntBASIC17.73■□□□□ 0.43
SmoP56726 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SmoP56726 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
SmoP56726 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.73■□□□□ 0.43
SmoP56726 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Mir7071-201ENSMUST00000184847 69 ntBASIC17.73■□□□□ 0.43
SmoP56726 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.73■□□□□ 0.43
SmoP56726 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SmoP56726 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SmoP56726 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SmoP56726 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SmoP56726 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.72■□□□□ 0.43
SmoP56726 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SmoP56726 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.72■□□□□ 0.43
SmoP56726 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SmoP56726 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.71■□□□□ 0.43
SmoP56726 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SmoP56726 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Gm38027-201ENSMUST00000192315 235 ntBASIC17.71■□□□□ 0.43
SmoP56726 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.71■□□□□ 0.43
SmoP56726 Gm30025-201ENSMUST00000218555 728 ntBASIC17.71■□□□□ 0.43
SmoP56726 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.71■□□□□ 0.43
SmoP56726 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SmoP56726 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SmoP56726 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SmoP56726 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SmoP56726 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.7■□□□□ 0.42
SmoP56726 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Gm24841-201ENSMUST00000158676 357 ntBASIC17.7■□□□□ 0.42
SmoP56726 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.7■□□□□ 0.42
SmoP56726 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.7■□□□□ 0.42
SmoP56726 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SmoP56726 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms