Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Lim2P56563 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lim2P56563 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
Lim2P56563 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Lim2P56563 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Lim2P56563 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.62■□□□□ 0.41
Lim2P56563 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.62■□□□□ 0.41
Lim2P56563 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.62■□□□□ 0.41
Lim2P56563 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.62■□□□□ 0.41
Lim2P56563 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.62■□□□□ 0.41
Lim2P56563 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.62■□□□□ 0.41
Lim2P56563 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lim2P56563 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lim2P56563 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lim2P56563 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.61■□□□□ 0.41
Lim2P56563 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.61■□□□□ 0.41
Lim2P56563 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.61■□□□□ 0.41
Lim2P56563 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.61■□□□□ 0.41
Lim2P56563 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.61■□□□□ 0.41
Lim2P56563 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.61■□□□□ 0.41
Lim2P56563 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lim2P56563 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.6■□□□□ 0.41
Lim2P56563 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.6■□□□□ 0.41
Lim2P56563 Gm43183-201ENSMUST00000200632 547 ntBASIC17.6■□□□□ 0.41
Lim2P56563 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.6■□□□□ 0.41
Lim2P56563 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.6■□□□□ 0.41
Lim2P56563 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.6■□□□□ 0.41
Lim2P56563 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.6■□□□□ 0.41
Lim2P56563 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lim2P56563 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.6■□□□□ 0.41
Lim2P56563 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lim2P56563 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lim2P56563 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lim2P56563 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lim2P56563 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.59■□□□□ 0.41
Lim2P56563 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.59■□□□□ 0.41
Lim2P56563 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Lim2P56563 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lim2P56563 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lim2P56563 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lim2P56563 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.58■□□□□ 0.41
Lim2P56563 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lim2P56563 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.58■□□□□ 0.41
Lim2P56563 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lim2P56563 Gm37292-201ENSMUST00000192062 758 ntBASIC17.58■□□□□ 0.4
Lim2P56563 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lim2P56563 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lim2P56563 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms