Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NrlP54846 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NrlP54846 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
NrlP54846 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NrlP54846 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.77■□□□□ 0.59
NrlP54846 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.76■□□□□ 0.59
NrlP54846 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Fst-202ENSMUST00000223640 2612 ntBASIC18.76■□□□□ 0.59
NrlP54846 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NrlP54846 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NrlP54846 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.75■□□□□ 0.59
NrlP54846 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.75■□□□□ 0.59
NrlP54846 Gm2274-201ENSMUST00000184539 609 ntBASIC18.75■□□□□ 0.59
NrlP54846 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NrlP54846 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NrlP54846 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NrlP54846 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NrlP54846 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NrlP54846 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NrlP54846 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NrlP54846 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NrlP54846 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.74■□□□□ 0.59
NrlP54846 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 AA414768-201ENSMUST00000121924 1257 ntBASIC18.74■□□□□ 0.59
NrlP54846 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.74■□□□□ 0.59
NrlP54846 Mir5130-201ENSMUST00000175160 84 ntBASIC18.74■□□□□ 0.59
NrlP54846 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.74■□□□□ 0.59
NrlP54846 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.74■□□□□ 0.59
NrlP54846 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.74■□□□□ 0.59
NrlP54846 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.74■□□□□ 0.59
NrlP54846 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.74■□□□□ 0.59
NrlP54846 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NrlP54846 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NrlP54846 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NrlP54846 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.73■□□□□ 0.59
NrlP54846 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NrlP54846 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NrlP54846 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.73■□□□□ 0.59
NrlP54846 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NrlP54846 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.72■□□□□ 0.59
NrlP54846 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NrlP54846 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NrlP54846 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NrlP54846 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NrlP54846 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.72■□□□□ 0.59
NrlP54846 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NrlP54846 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.71■□□□□ 0.59
NrlP54846 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NrlP54846 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NrlP54846 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Gm6345-202ENSMUST00000180900 204 ntBASIC18.71■□□□□ 0.59
NrlP54846 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.71■□□□□ 0.59
NrlP54846 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NrlP54846 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NrlP54846 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms