Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hmga2P52927 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hmga2P52927 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Hmga2P52927 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Hmga2P52927 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Hmga2P52927 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Hmga2P52927 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.05■□□□□ -0
Hmga2P52927 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Hmga2P52927 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hmga2P52927 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hmga2P52927 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.04■□□□□ -0
Hmga2P52927 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hmga2P52927 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Hmga2P52927 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.04■□□□□ -0
Hmga2P52927 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hmga2P52927 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.04■□□□□ -0
Hmga2P52927 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmga2P52927 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.03■□□□□ -0
Hmga2P52927 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.03■□□□□ -0
Hmga2P52927 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Hmga2P52927 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hmga2P52927 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.03■□□□□ -0
Hmga2P52927 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmga2P52927 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.02■□□□□ -0
Hmga2P52927 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
Hmga2P52927 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Gm13234-201ENSMUST00000120010 747 ntBASIC15.02■□□□□ -0
Hmga2P52927 Mir8112-201ENSMUST00000184382 131 ntBASIC15.02■□□□□ -0
Hmga2P52927 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmga2P52927 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.02■□□□□ -0
Hmga2P52927 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.02□□□□□ -0.01
Hmga2P52927 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga2P52927 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga2P52927 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga2P52927 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga2P52927 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmga2P52927 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hmga2P52927 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hmga2P52927 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hmga2P52927 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.01□□□□□ -0.01
Hmga2P52927 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.01□□□□□ -0.01
Hmga2P52927 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmga2P52927 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms