Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek1P51954 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Nek1P51954 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Nek1P51954 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek1P51954 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek1P51954 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek1P51954 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nek1P51954 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.65■□□□□ 0.74
Nek1P51954 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.65■□□□□ 0.74
Nek1P51954 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.65■□□□□ 0.74
Nek1P51954 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nek1P51954 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nek1P51954 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nek1P51954 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.64■□□□□ 0.73
Nek1P51954 Mir6982-201ENSMUST00000184354 68 ntBASIC19.64■□□□□ 0.73
Nek1P51954 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nek1P51954 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nek1P51954 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nek1P51954 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.63■□□□□ 0.73
Nek1P51954 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nek1P51954 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.63■□□□□ 0.73
Nek1P51954 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.63■□□□□ 0.73
Nek1P51954 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.63■□□□□ 0.73
Nek1P51954 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nek1P51954 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.63■□□□□ 0.73
Nek1P51954 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nek1P51954 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nek1P51954 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nek1P51954 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.62■□□□□ 0.73
Nek1P51954 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nek1P51954 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nek1P51954 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nek1P51954 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.61■□□□□ 0.73
Nek1P51954 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nek1P51954 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nek1P51954 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.6■□□□□ 0.73
Nek1P51954 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nek1P51954 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nek1P51954 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nek1P51954 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nek1P51954 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nek1P51954 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms