Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
CcnfP51944 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CcnfP51944 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CcnfP51944 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CcnfP51944 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CcnfP51944 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CcnfP51944 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CcnfP51944 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CcnfP51944 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CcnfP51944 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CcnfP51944 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CcnfP51944 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.83■□□□□ 0.28
CcnfP51944 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CcnfP51944 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.82■□□□□ 0.28
CcnfP51944 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.82■□□□□ 0.28
CcnfP51944 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CcnfP51944 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CcnfP51944 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CcnfP51944 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcnfP51944 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.81■□□□□ 0.28
CcnfP51944 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CcnfP51944 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.81■□□□□ 0.28
CcnfP51944 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CcnfP51944 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.81■□□□□ 0.28
CcnfP51944 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.81■□□□□ 0.28
CcnfP51944 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcnfP51944 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CcnfP51944 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.8■□□□□ 0.28
CcnfP51944 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CcnfP51944 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.8■□□□□ 0.28
CcnfP51944 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.8■□□□□ 0.28
CcnfP51944 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CcnfP51944 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CcnfP51944 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcnfP51944 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.79■□□□□ 0.28
CcnfP51944 Gm13234-201ENSMUST00000120010 747 ntBASIC16.79■□□□□ 0.28
CcnfP51944 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Gm45417-201ENSMUST00000209533 758 ntBASIC16.79■□□□□ 0.28
CcnfP51944 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcnfP51944 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CcnfP51944 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
CcnfP51944 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CcnfP51944 Gm29791-202ENSMUST00000207888 369 ntBASIC16.78■□□□□ 0.28
CcnfP51944 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcnfP51944 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CcnfP51944 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms