Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gabrb1P50571 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.68■□□□□ 0.1
Gabrb1P50571 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.68■□□□□ 0.1
Gabrb1P50571 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gabrb1P50571 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gabrb1P50571 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gabrb1P50571 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
Gabrb1P50571 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gabrb1P50571 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gabrb1P50571 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.67■□□□□ 0.1
Gabrb1P50571 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.67■□□□□ 0.1
Gabrb1P50571 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gabrb1P50571 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Reep4-203ENSMUST00000226563 1444 ntBASIC15.67■□□□□ 0.1
Gabrb1P50571 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gabrb1P50571 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gabrb1P50571 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.66■□□□□ 0.1
Gabrb1P50571 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gabrb1P50571 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.66■□□□□ 0.1
Gabrb1P50571 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.66■□□□□ 0.1
Gabrb1P50571 Gm27454-201ENSMUST00000185090 204 ntBASIC15.66■□□□□ 0.1
Gabrb1P50571 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gabrb1P50571 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gabrb1P50571 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Gm43060-201ENSMUST00000200621 289 ntBASIC15.65■□□□□ 0.1
Gabrb1P50571 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gabrb1P50571 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Gabrb1P50571 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Gabrb1P50571 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Gabrb1P50571 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gabrb1P50571 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Gabrb1P50571 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Gm12821-201ENSMUST00000120022 600 ntBASIC15.64■□□□□ 0.09
Gabrb1P50571 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.64■□□□□ 0.09
Gabrb1P50571 Gm43017-201ENSMUST00000198296 752 ntBASIC15.64■□□□□ 0.09
Gabrb1P50571 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gabrb1P50571 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms