Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hist1h1aP43275 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Gm8969-201ENSMUST00000199694 526 ntBASIC14.57□□□□□ -0.08
Hist1h1aP43275 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hist1h1aP43275 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hist1h1aP43275 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hist1h1aP43275 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.55□□□□□ -0.08
Hist1h1aP43275 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.55□□□□□ -0.08
Hist1h1aP43275 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.55□□□□□ -0.08
Hist1h1aP43275 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.55□□□□□ -0.08
Hist1h1aP43275 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.55□□□□□ -0.08
Hist1h1aP43275 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hist1h1aP43275 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.54□□□□□ -0.08
Hist1h1aP43275 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hist1h1aP43275 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Gm10493-201ENSMUST00000097270 612 ntBASIC14.53□□□□□ -0.08
Hist1h1aP43275 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hist1h1aP43275 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h1aP43275 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.52□□□□□ -0.08
Hist1h1aP43275 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hist1h1aP43275 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms