Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC23.69■■□□□ 1.38
Col18a1P39061 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col18a1P39061 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col18a1P39061 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Col18a1P39061 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC23.68■■□□□ 1.38
Col18a1P39061 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC23.68■■□□□ 1.38
Col18a1P39061 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Col18a1P39061 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col18a1P39061 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col18a1P39061 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC23.68■■□□□ 1.38
Col18a1P39061 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Col18a1P39061 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Col18a1P39061 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Col18a1P39061 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col18a1P39061 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col18a1P39061 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC23.67■■□□□ 1.38
Col18a1P39061 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC23.67■■□□□ 1.38
Col18a1P39061 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC23.67■■□□□ 1.38
Col18a1P39061 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col18a1P39061 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC23.66■■□□□ 1.38
Col18a1P39061 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC23.66■■□□□ 1.38
Col18a1P39061 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Col18a1P39061 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col18a1P39061 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44357-201ENSMUST00000195897 142 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm19658-201ENSMUST00000196231 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44367-201ENSMUST00000196836 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44350-201ENSMUST00000197197 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44390-201ENSMUST00000197533 144 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44313-201ENSMUST00000198018 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44486-201ENSMUST00000198508 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44454-201ENSMUST00000198541 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44314-201ENSMUST00000199263 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44394-201ENSMUST00000199558 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44484-201ENSMUST00000199873 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44466-201ENSMUST00000200264 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Gm44359-201ENSMUST00000200671 138 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
Col18a1P39061 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 Gm11594-201ENSMUST00000122313 162 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC23.65■■□□□ 1.38
Col18a1P39061 AC154621.1-201ENSMUST00000226155 1119 ntBASIC23.65■■□□□ 1.38
Col18a1P39061 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Col18a1P39061 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col18a1P39061 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Col18a1P39061 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col18a1P39061 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col18a1P39061 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Col18a1P39061 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Col18a1P39061 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col18a1P39061 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col18a1P39061 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC23.63■■□□□ 1.37
Col18a1P39061 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Col18a1P39061 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col18a1P39061 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.63■■□□□ 1.37
Col18a1P39061 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col18a1P39061 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col18a1P39061 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col18a1P39061 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col18a1P39061 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col18a1P39061 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col18a1P39061 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col18a1P39061 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Col18a1P39061 Gm12644-201ENSMUST00000119935 606 ntBASIC23.62■■□□□ 1.37
Col18a1P39061 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC23.62■■□□□ 1.37
Col18a1P39061 Mir5126-201ENSMUST00000175513 77 ntBASIC23.62■■□□□ 1.37
Col18a1P39061 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Col18a1P39061 Gm7935-201ENSMUST00000100555 1278 ntBASIC23.61■■□□□ 1.37
Col18a1P39061 Gm11779-201ENSMUST00000118541 368 ntBASIC23.61■■□□□ 1.37
Col18a1P39061 Mir5131-201ENSMUST00000175426 93 ntBASIC23.61■■□□□ 1.37
Col18a1P39061 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col18a1P39061 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC23.61■■□□□ 1.37
Col18a1P39061 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms