Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rom1P32958 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rom1P32958 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.01□□□□□ -0.17
Rom1P32958 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rom1P32958 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.01□□□□□ -0.17
Rom1P32958 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.01□□□□□ -0.17
Rom1P32958 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rom1P32958 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rom1P32958 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rom1P32958 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.01□□□□□ -0.17
Rom1P32958 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rom1P32958 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rom1P32958 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14□□□□□ -0.17
Rom1P32958 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Gm14281-201ENSMUST00000121700 1294 ntBASIC14□□□□□ -0.17
Rom1P32958 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14□□□□□ -0.17
Rom1P32958 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rom1P32958 Rps24-207ENSMUST00000224568 714 ntBASIC14□□□□□ -0.17
Rom1P32958 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rom1P32958 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rom1P32958 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rom1P32958 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rom1P32958 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.99□□□□□ -0.17
Rom1P32958 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.99□□□□□ -0.17
Rom1P32958 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.99□□□□□ -0.17
Rom1P32958 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.99□□□□□ -0.17
Rom1P32958 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rom1P32958 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rom1P32958 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.99□□□□□ -0.17
Rom1P32958 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.99□□□□□ -0.17
Rom1P32958 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rom1P32958 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rom1P32958 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rom1P32958 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Gm14117-201ENSMUST00000122417 843 ntBASIC13.98□□□□□ -0.17
Rom1P32958 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rom1P32958 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rom1P32958 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rom1P32958 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.98□□□□□ -0.17
Rom1P32958 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.98□□□□□ -0.17
Rom1P32958 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.97□□□□□ -0.17
Rom1P32958 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rom1P32958 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms