Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RxrbP28704 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RxrbP28704 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RxrbP28704 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RxrbP28704 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.74■□□□□ 0.43
RxrbP28704 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.74■□□□□ 0.43
RxrbP28704 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RxrbP28704 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.73■□□□□ 0.43
RxrbP28704 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.73■□□□□ 0.43
RxrbP28704 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RxrbP28704 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.72■□□□□ 0.43
RxrbP28704 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RxrbP28704 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.72■□□□□ 0.43
RxrbP28704 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RxrbP28704 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RxrbP28704 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RxrbP28704 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RxrbP28704 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RxrbP28704 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RxrbP28704 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.71■□□□□ 0.43
RxrbP28704 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.71■□□□□ 0.43
RxrbP28704 Mir8112-201ENSMUST00000184382 131 ntBASIC17.71■□□□□ 0.43
RxrbP28704 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RxrbP28704 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RxrbP28704 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RxrbP28704 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RxrbP28704 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RxrbP28704 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RxrbP28704 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RxrbP28704 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
RxrbP28704 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RxrbP28704 Gm10493-201ENSMUST00000097270 612 ntBASIC17.7■□□□□ 0.42
RxrbP28704 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.7■□□□□ 0.42
RxrbP28704 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RxrbP28704 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RxrbP28704 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RxrbP28704 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.7■□□□□ 0.42
RxrbP28704 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RxrbP28704 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RxrbP28704 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.69■□□□□ 0.42
RxrbP28704 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RxrbP28704 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RxrbP28704 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RxrbP28704 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms