Protein–RNA interactions for Protein: P28271

Aco1, Cytoplasmic aconitate hydratase, mousemouse

Known RBP Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aco1P28271 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
Aco1P28271 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Aco1P28271 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Aco1P28271 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Aco1P28271 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Aco1P28271 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Aco1P28271 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Aco1P28271 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Aco1P28271 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Aco1P28271 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Aco1P28271 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.07■□□□□ 0.8
Aco1P28271 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Gm11643-201ENSMUST00000119578 864 ntBASIC20.07■□□□□ 0.8
Aco1P28271 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.07■□□□□ 0.8
Aco1P28271 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Gm29791-202ENSMUST00000207888 369 ntBASIC20.07■□□□□ 0.8
Aco1P28271 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Aco1P28271 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.07■□□□□ 0.8
Aco1P28271 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aco1P28271 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Aco1P28271 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.06■□□□□ 0.8
Aco1P28271 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Gm13401-201ENSMUST00000117074 291 ntBASIC20.06■□□□□ 0.8
Aco1P28271 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Gm30025-201ENSMUST00000218555 728 ntBASIC20.06■□□□□ 0.8
Aco1P28271 Timm23-208ENSMUST00000226683 750 ntBASIC20.06■□□□□ 0.8
Aco1P28271 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.06■□□□□ 0.8
Aco1P28271 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Aco1P28271 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Aco1P28271 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aco1P28271 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.05■□□□□ 0.8
Aco1P28271 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.05■□□□□ 0.8
Aco1P28271 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aco1P28271 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Aco1P28271 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Aco1P28271 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aco1P28271 Gm6433-201ENSMUST00000118634 875 ntBASIC20.04■□□□□ 0.8
Aco1P28271 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aco1P28271 Odf3b-204ENSMUST00000227834 930 ntBASIC20.04■□□□□ 0.8
Aco1P28271 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Aco1P28271 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aco1P28271 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Aco1P28271 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.04■□□□□ 0.8
Aco1P28271 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aco1P28271 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Aco1P28271 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.03■□□□□ 0.8
Aco1P28271 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Aco1P28271 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.03■□□□□ 0.8
Aco1P28271 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Aco1P28271 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.02■□□□□ 0.8
Aco1P28271 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Aco1P28271 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aco1P28271 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aco1P28271 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Aco1P28271 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aco1P28271 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aco1P28271 Gm10418-201ENSMUST00000100943 576 ntBASIC20.02■□□□□ 0.8
Aco1P28271 Gm3375-201ENSMUST00000203929 796 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms