Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nfkb1P25799 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nfkb1P25799 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Nfkb1P25799 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nfkb1P25799 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nfkb1P25799 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nfkb1P25799 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Gm7889-201ENSMUST00000185591 958 ntBASIC18.11■□□□□ 0.49
Nfkb1P25799 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.11■□□□□ 0.49
Nfkb1P25799 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nfkb1P25799 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nfkb1P25799 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nfkb1P25799 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.1■□□□□ 0.49
Nfkb1P25799 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.1■□□□□ 0.49
Nfkb1P25799 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Nfkb1P25799 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.1■□□□□ 0.49
Nfkb1P25799 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nfkb1P25799 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nfkb1P25799 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.09■□□□□ 0.49
Nfkb1P25799 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.09■□□□□ 0.49
Nfkb1P25799 Gm4974-201ENSMUST00000209974 875 ntBASIC18.09■□□□□ 0.49
Nfkb1P25799 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nfkb1P25799 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nfkb1P25799 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.08■□□□□ 0.49
Nfkb1P25799 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nfkb1P25799 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nfkb1P25799 Gm13401-201ENSMUST00000117074 291 ntBASIC18.08■□□□□ 0.48
Nfkb1P25799 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nfkb1P25799 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Nfkb1P25799 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.08■□□□□ 0.48
Nfkb1P25799 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nfkb1P25799 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nfkb1P25799 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nfkb1P25799 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nfkb1P25799 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.07■□□□□ 0.48
Nfkb1P25799 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nfkb1P25799 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nfkb1P25799 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.07■□□□□ 0.48
Nfkb1P25799 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nfkb1P25799 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nfkb1P25799 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nfkb1P25799 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.07■□□□□ 0.48
Nfkb1P25799 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nfkb1P25799 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Nfkb1P25799 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms