Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.29■□□□□ 0.52
Hoxd8P23463 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Hoxd8P23463 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hoxd8P23463 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Hoxd8P23463 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hoxd8P23463 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hoxd8P23463 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hoxd8P23463 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.28■□□□□ 0.52
Hoxd8P23463 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hoxd8P23463 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxd8P23463 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxd8P23463 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxd8P23463 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxd8P23463 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.27■□□□□ 0.52
Hoxd8P23463 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.27■□□□□ 0.52
Hoxd8P23463 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.27■□□□□ 0.52
Hoxd8P23463 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.27■□□□□ 0.52
Hoxd8P23463 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxd8P23463 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxd8P23463 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Hoxd8P23463 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxd8P23463 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.51
Hoxd8P23463 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.26■□□□□ 0.51
Hoxd8P23463 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.26■□□□□ 0.51
Hoxd8P23463 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Hoxd8P23463 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.26■□□□□ 0.51
Hoxd8P23463 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.26■□□□□ 0.51
Hoxd8P23463 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.26■□□□□ 0.51
Hoxd8P23463 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 Gm27389-201ENSMUST00000183622 195 ntBASIC18.26■□□□□ 0.51
Hoxd8P23463 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hoxd8P23463 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxd8P23463 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.25■□□□□ 0.51
Hoxd8P23463 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.25■□□□□ 0.51
Hoxd8P23463 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Hoxd8P23463 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxd8P23463 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxd8P23463 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.25■□□□□ 0.51
Hoxd8P23463 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hoxd8P23463 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxd8P23463 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxd8P23463 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxd8P23463 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.24■□□□□ 0.51
Hoxd8P23463 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.24■□□□□ 0.51
Hoxd8P23463 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.24■□□□□ 0.51
Hoxd8P23463 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Hoxd8P23463 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxd8P23463 Gm5587-201ENSMUST00000206270 674 ntBASIC18.24■□□□□ 0.51
Hoxd8P23463 Gm7213-201ENSMUST00000215977 950 ntBASIC18.24■□□□□ 0.51
Hoxd8P23463 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.24■□□□□ 0.51
Hoxd8P23463 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxd8P23463 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxd8P23463 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hoxd8P23463 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.23■□□□□ 0.51
Hoxd8P23463 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Hoxd8P23463 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Hoxd8P23463 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.23■□□□□ 0.51
Hoxd8P23463 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.23■□□□□ 0.51
Hoxd8P23463 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Hoxd8P23463 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hoxd8P23463 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.23■□□□□ 0.51
Hoxd8P23463 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxd8P23463 Fst-202ENSMUST00000223640 2612 ntBASIC18.22■□□□□ 0.51
Hoxd8P23463 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxd8P23463 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxd8P23463 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxd8P23463 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.22■□□□□ 0.51
Hoxd8P23463 Gm9013-201ENSMUST00000132939 882 ntBASIC18.22■□□□□ 0.51
Hoxd8P23463 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms