Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srp54P14576 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Srp54P14576 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.33■□□□□ 0.36
Srp54P14576 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.33■□□□□ 0.36
Srp54P14576 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.33■□□□□ 0.36
Srp54P14576 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Odf3b-204ENSMUST00000227834 930 ntBASIC17.33■□□□□ 0.36
Srp54P14576 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Srp54P14576 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Srp54P14576 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Srp54P14576 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Srp54P14576 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.32■□□□□ 0.36
Srp54P14576 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Srp54P14576 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.32■□□□□ 0.36
Srp54P14576 Gm30025-201ENSMUST00000218555 728 ntBASIC17.32■□□□□ 0.36
Srp54P14576 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srp54P14576 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.31■□□□□ 0.36
Srp54P14576 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.31■□□□□ 0.36
Srp54P14576 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Gm11643-201ENSMUST00000119578 864 ntBASIC17.31■□□□□ 0.36
Srp54P14576 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Srp54P14576 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Srp54P14576 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Tgds-204ENSMUST00000228543 1594 ntBASIC17.31■□□□□ 0.36
Srp54P14576 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srp54P14576 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Srp54P14576 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.3■□□□□ 0.36
Srp54P14576 Gm43799-201ENSMUST00000201845 579 ntBASIC17.3■□□□□ 0.36
Srp54P14576 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.3■□□□□ 0.36
Srp54P14576 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.3■□□□□ 0.36
Srp54P14576 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srp54P14576 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Srp54P14576 Gm7977-201ENSMUST00000193787 748 ntBASIC17.29■□□□□ 0.36
Srp54P14576 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Gm9987-201ENSMUST00000069768 567 ntBASIC17.29■□□□□ 0.36
Srp54P14576 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Srp54P14576 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srp54P14576 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Srp54P14576 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.29■□□□□ 0.36
Srp54P14576 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.29■□□□□ 0.36
Srp54P14576 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Srp54P14576 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Srp54P14576 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Srp54P14576 Gm3375-201ENSMUST00000203929 796 ntBASIC17.28■□□□□ 0.36
Srp54P14576 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.28■□□□□ 0.36
Srp54P14576 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Srp54P14576 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Srp54P14576 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Srp54P14576 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srp54P14576 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms