Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rb1P13405 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rb1P13405 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rb1P13405 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
Rb1P13405 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.96■□□□□ 0.47
Rb1P13405 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rb1P13405 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rb1P13405 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Rb1P13405 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.96■□□□□ 0.47
Rb1P13405 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.96■□□□□ 0.47
Rb1P13405 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.96■□□□□ 0.47
Rb1P13405 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rb1P13405 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rb1P13405 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rb1P13405 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.95■□□□□ 0.46
Rb1P13405 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.95■□□□□ 0.46
Rb1P13405 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.95■□□□□ 0.46
Rb1P13405 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rb1P13405 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Rb1P13405 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.94■□□□□ 0.46
Rb1P13405 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Gm5417-201ENSMUST00000079706 384 ntBASIC17.94■□□□□ 0.46
Rb1P13405 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.94■□□□□ 0.46
Rb1P13405 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rb1P13405 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.93■□□□□ 0.46
Rb1P13405 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Rb1P13405 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Gm43799-201ENSMUST00000201845 579 ntBASIC17.93■□□□□ 0.46
Rb1P13405 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.93■□□□□ 0.46
Rb1P13405 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rb1P13405 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rb1P13405 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.93■□□□□ 0.46
Rb1P13405 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Rb1P13405 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.92■□□□□ 0.46
Rb1P13405 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.92■□□□□ 0.46
Rb1P13405 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rb1P13405 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms