Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.09■□□□□ 0.65
RaraP11416 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RaraP11416 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RaraP11416 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RaraP11416 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
RaraP11416 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RaraP11416 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.09■□□□□ 0.65
RaraP11416 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.09■□□□□ 0.65
RaraP11416 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RaraP11416 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RaraP11416 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RaraP11416 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RaraP11416 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RaraP11416 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RaraP11416 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RaraP11416 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RaraP11416 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RaraP11416 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
RaraP11416 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RaraP11416 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.08■□□□□ 0.64
RaraP11416 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RaraP11416 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.08■□□□□ 0.64
RaraP11416 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RaraP11416 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RaraP11416 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RaraP11416 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.07■□□□□ 0.64
RaraP11416 Gm26524-201ENSMUST00000192339 390 ntBASIC19.07■□□□□ 0.64
RaraP11416 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.07■□□□□ 0.64
RaraP11416 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RaraP11416 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.07■□□□□ 0.64
RaraP11416 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.07■□□□□ 0.64
RaraP11416 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RaraP11416 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RaraP11416 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RaraP11416 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RaraP11416 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.06■□□□□ 0.64
RaraP11416 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Gm8495-201ENSMUST00000188740 694 ntBASIC19.06■□□□□ 0.64
RaraP11416 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.06■□□□□ 0.64
RaraP11416 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RaraP11416 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RaraP11416 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.05■□□□□ 0.64
RaraP11416 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.05■□□□□ 0.64
RaraP11416 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RaraP11416 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.05■□□□□ 0.64
RaraP11416 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.05■□□□□ 0.64
RaraP11416 Gm29791-202ENSMUST00000207888 369 ntBASIC19.05■□□□□ 0.64
RaraP11416 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.05■□□□□ 0.64
RaraP11416 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.05■□□□□ 0.64
RaraP11416 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RaraP11416 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RaraP11416 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.05■□□□□ 0.64
RaraP11416 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.04■□□□□ 0.64
RaraP11416 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RaraP11416 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RaraP11416 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RaraP11416 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms