Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hoxc6P10629 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc6P10629 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc6P10629 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hoxc6P10629 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hoxc6P10629 Gm28033-201ENSMUST00000184224 96 ntBASIC19.62■□□□□ 0.73
Hoxc6P10629 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.62■□□□□ 0.73
Hoxc6P10629 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.62■□□□□ 0.73
Hoxc6P10629 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hoxc6P10629 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hoxc6P10629 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc6P10629 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hoxc6P10629 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 Gm9731-201ENSMUST00000209480 747 ntBASIC19.61■□□□□ 0.73
Hoxc6P10629 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc6P10629 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hoxc6P10629 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.6■□□□□ 0.73
Hoxc6P10629 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hoxc6P10629 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc6P10629 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxc6P10629 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.59■□□□□ 0.73
Hoxc6P10629 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.59■□□□□ 0.73
Hoxc6P10629 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Gm7213-201ENSMUST00000215977 950 ntBASIC19.59■□□□□ 0.73
Hoxc6P10629 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc6P10629 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc6P10629 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc6P10629 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.58■□□□□ 0.73
Hoxc6P10629 Tgds-204ENSMUST00000228543 1594 ntBASIC19.58■□□□□ 0.73
Hoxc6P10629 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc6P10629 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc6P10629 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc6P10629 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc6P10629 Gm37025-201ENSMUST00000195159 829 ntBASIC19.58■□□□□ 0.72
Hoxc6P10629 Gm29791-202ENSMUST00000207888 369 ntBASIC19.58■□□□□ 0.72
Hoxc6P10629 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc6P10629 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Hoxc6P10629 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc6P10629 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc6P10629 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc6P10629 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc6P10629 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc6P10629 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc6P10629 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.57■□□□□ 0.72
Hoxc6P10629 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.57■□□□□ 0.72
Hoxc6P10629 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc6P10629 Gm17807-201ENSMUST00000186869 298 ntBASIC19.57■□□□□ 0.72
Hoxc6P10629 Gm17808-201ENSMUST00000200859 894 ntBASIC19.57■□□□□ 0.72
Hoxc6P10629 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.57■□□□□ 0.72
Hoxc6P10629 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc6P10629 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc6P10629 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hoxc6P10629 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.56■□□□□ 0.72
Hoxc6P10629 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.56■□□□□ 0.72
Hoxc6P10629 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxc6P10629 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Hoxc6P10629 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxc6P10629 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms