Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PtcraP0C6B2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PtcraP0C6B2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PtcraP0C6B2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PtcraP0C6B2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.33■□□□□ 0.05
PtcraP0C6B2 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.33■□□□□ 0.05
PtcraP0C6B2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PtcraP0C6B2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Gm13401-201ENSMUST00000117074 291 ntBASIC15.32■□□□□ 0.04
PtcraP0C6B2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PtcraP0C6B2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.31■□□□□ 0.04
PtcraP0C6B2 Gm15378-201ENSMUST00000121894 207 ntBASIC15.31■□□□□ 0.04
PtcraP0C6B2 Gm10653-202ENSMUST00000139570 835 ntBASIC15.31■□□□□ 0.04
PtcraP0C6B2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.31■□□□□ 0.04
PtcraP0C6B2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PtcraP0C6B2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Gm6576-201ENSMUST00000169678 883 ntBASIC15.3■□□□□ 0.04
PtcraP0C6B2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PtcraP0C6B2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Gm42545-201ENSMUST00000202755 922 ntBASIC15.29■□□□□ 0.04
PtcraP0C6B2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PtcraP0C6B2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.29■□□□□ 0.04
PtcraP0C6B2 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.29■□□□□ 0.04
PtcraP0C6B2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.29■□□□□ 0.04
PtcraP0C6B2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms