Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ApoeP08226 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ApoeP08226 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ApoeP08226 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ApoeP08226 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ApoeP08226 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ApoeP08226 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ApoeP08226 Reep4-203ENSMUST00000226563 1444 ntBASIC16.72■□□□□ 0.27
ApoeP08226 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ApoeP08226 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.72■□□□□ 0.27
ApoeP08226 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.72■□□□□ 0.27
ApoeP08226 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.72■□□□□ 0.27
ApoeP08226 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ApoeP08226 Haglr-201ENSMUST00000100000 2085 ntBASIC16.72■□□□□ 0.27
ApoeP08226 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ApoeP08226 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.72■□□□□ 0.27
ApoeP08226 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
ApoeP08226 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ApoeP08226 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.71■□□□□ 0.27
ApoeP08226 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.71■□□□□ 0.27
ApoeP08226 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Gm9988-201ENSMUST00000069786 435 ntBASIC16.71■□□□□ 0.27
ApoeP08226 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ApoeP08226 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.7■□□□□ 0.26
ApoeP08226 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ApoeP08226 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.7■□□□□ 0.26
ApoeP08226 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ApoeP08226 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.7■□□□□ 0.26
ApoeP08226 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.7■□□□□ 0.26
ApoeP08226 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ApoeP08226 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ApoeP08226 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.7■□□□□ 0.26
ApoeP08226 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.7■□□□□ 0.26
ApoeP08226 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ApoeP08226 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ApoeP08226 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ApoeP08226 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ApoeP08226 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.69■□□□□ 0.26
ApoeP08226 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.69■□□□□ 0.26
ApoeP08226 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.69■□□□□ 0.26
ApoeP08226 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ApoeP08226 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ApoeP08226 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ApoeP08226 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ApoeP08226 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.68■□□□□ 0.26
ApoeP08226 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ApoeP08226 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ApoeP08226 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ApoeP08226 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ApoeP08226 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ApoeP08226 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ApoeP08226 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ApoeP08226 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms