Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxa4P06798 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.36■□□□□ 0.37
Hoxa4P06798 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Hoxa4P06798 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxa4P06798 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa4P06798 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxa4P06798 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.35■□□□□ 0.37
Hoxa4P06798 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxa4P06798 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxa4P06798 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.35■□□□□ 0.37
Hoxa4P06798 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.35■□□□□ 0.37
Hoxa4P06798 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxa4P06798 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hoxa4P06798 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa4P06798 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hoxa4P06798 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.34■□□□□ 0.37
Hoxa4P06798 Gm3375-201ENSMUST00000203929 796 ntBASIC17.34■□□□□ 0.37
Hoxa4P06798 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa4P06798 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxa4P06798 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.33■□□□□ 0.37
Hoxa4P06798 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxa4P06798 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxa4P06798 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxa4P06798 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Hoxa4P06798 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxa4P06798 Gm38027-201ENSMUST00000192315 235 ntBASIC17.33■□□□□ 0.36
Hoxa4P06798 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.33■□□□□ 0.36
Hoxa4P06798 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.33■□□□□ 0.36
Hoxa4P06798 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxa4P06798 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxa4P06798 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hoxa4P06798 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.32■□□□□ 0.36
Hoxa4P06798 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.32■□□□□ 0.36
Hoxa4P06798 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hoxa4P06798 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.32■□□□□ 0.36
Hoxa4P06798 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxa4P06798 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Hoxa4P06798 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxa4P06798 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Hoxa4P06798 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Gm37055-201ENSMUST00000191866 133 ntBASIC17.31■□□□□ 0.36
Hoxa4P06798 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hoxa4P06798 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxa4P06798 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.31■□□□□ 0.36
Hoxa4P06798 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxa4P06798 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms