Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm15375-201ENSMUST00000119510 849 ntBASIC17.82■□□□□ 0.44
PdgfrbP05622 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.82■□□□□ 0.44
PdgfrbP05622 Gm29791-202ENSMUST00000207888 369 ntBASIC17.82■□□□□ 0.44
PdgfrbP05622 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PdgfrbP05622 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PdgfrbP05622 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PdgfrbP05622 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PdgfrbP05622 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.82■□□□□ 0.44
PdgfrbP05622 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PdgfrbP05622 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PdgfrbP05622 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PdgfrbP05622 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.81■□□□□ 0.44
PdgfrbP05622 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.81■□□□□ 0.44
PdgfrbP05622 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.81■□□□□ 0.44
PdgfrbP05622 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PdgfrbP05622 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.8■□□□□ 0.44
PdgfrbP05622 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.8■□□□□ 0.44
PdgfrbP05622 Gm10653-202ENSMUST00000139570 835 ntBASIC17.8■□□□□ 0.44
PdgfrbP05622 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.8■□□□□ 0.44
PdgfrbP05622 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.8■□□□□ 0.44
PdgfrbP05622 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PdgfrbP05622 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PdgfrbP05622 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PdgfrbP05622 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PdgfrbP05622 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.79■□□□□ 0.44
PdgfrbP05622 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PdgfrbP05622 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
PdgfrbP05622 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.79■□□□□ 0.44
PdgfrbP05622 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.79■□□□□ 0.44
PdgfrbP05622 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PdgfrbP05622 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PdgfrbP05622 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.78■□□□□ 0.44
PdgfrbP05622 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PdgfrbP05622 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Mir6349-201ENSMUST00000184059 97 ntBASIC17.78■□□□□ 0.44
PdgfrbP05622 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PdgfrbP05622 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.78■□□□□ 0.44
PdgfrbP05622 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PdgfrbP05622 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PdgfrbP05622 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PdgfrbP05622 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms