Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
Col4a1P02463 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a1P02463 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a1P02463 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a1P02463 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a1P02463 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.82■■□□□ 1.08
Col4a1P02463 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a1P02463 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a1P02463 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col4a1P02463 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.81■■□□□ 1.08
Col4a1P02463 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.81■■□□□ 1.08
Col4a1P02463 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.81■■□□□ 1.08
Col4a1P02463 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Col4a1P02463 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a1P02463 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.81■■□□□ 1.08
Col4a1P02463 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a1P02463 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a1P02463 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Col4a1P02463 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a1P02463 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.8■■□□□ 1.08
Col4a1P02463 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a1P02463 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Col4a1P02463 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a1P02463 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a1P02463 Gm14859-201ENSMUST00000117752 357 ntBASIC21.79■■□□□ 1.08
Col4a1P02463 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a1P02463 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a1P02463 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a1P02463 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.79■■□□□ 1.08
Col4a1P02463 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a1P02463 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a1P02463 Iqck-206ENSMUST00000208658 2891 ntBASIC21.79■■□□□ 1.08
Col4a1P02463 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a1P02463 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.79■■□□□ 1.08
Col4a1P02463 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Gm27704-201ENSMUST00000185094 107 ntBASIC21.78■■□□□ 1.08
Col4a1P02463 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a1P02463 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col4a1P02463 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col4a1P02463 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a1P02463 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a1P02463 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a1P02463 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a1P02463 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.77■■□□□ 1.08
Col4a1P02463 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.77■■□□□ 1.07
Col4a1P02463 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.76■■□□□ 1.07
Col4a1P02463 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.76■■□□□ 1.07
Col4a1P02463 Gm13474-201ENSMUST00000122466 815 ntBASIC21.76■■□□□ 1.07
Col4a1P02463 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Col4a1P02463 Actl10-202ENSMUST00000226583 1501 ntBASIC21.76■■□□□ 1.07
Col4a1P02463 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a1P02463 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Gm9013-201ENSMUST00000132939 882 ntBASIC21.75■■□□□ 1.07
Col4a1P02463 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.75■■□□□ 1.07
Col4a1P02463 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.75■■□□□ 1.07
Col4a1P02463 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a1P02463 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.74■■□□□ 1.07
Col4a1P02463 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a1P02463 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Col4a1P02463 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.74■■□□□ 1.07
Col4a1P02463 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.74■■□□□ 1.07
Col4a1P02463 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Col4a1P02463 Gm18958-201ENSMUST00000174258 762 ntBASIC21.74■■□□□ 1.07
Col4a1P02463 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.74■■□□□ 1.07
Col4a1P02463 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a1P02463 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a1P02463 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a1P02463 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms