Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
P01852 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
P01852 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.1■□□□□ 0.17
P01852 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
P01852 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01852 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
P01852 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.1■□□□□ 0.17
P01852 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
P01852 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
P01852 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01852 Mir2861-201ENSMUST00000175539 82 ntBASIC16.09■□□□□ 0.17
P01852 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01852 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
P01852 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01852 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01852 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
P01852 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01852 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.09■□□□□ 0.17
P01852 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01852 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.08■□□□□ 0.17
P01852 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
P01852 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 Gm18025-201ENSMUST00000221733 862 ntBASIC16.08■□□□□ 0.16
P01852 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.08■□□□□ 0.16
P01852 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.08■□□□□ 0.16
P01852 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P01852 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P01852 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
P01852 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
P01852 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.07■□□□□ 0.16
P01852 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.07■□□□□ 0.16
P01852 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.07■□□□□ 0.16
P01852 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.07■□□□□ 0.16
P01852 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.07■□□□□ 0.16
P01852 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.07■□□□□ 0.16
P01852 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
P01852 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.07■□□□□ 0.16
P01852 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
P01852 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
P01852 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.06■□□□□ 0.16
P01852 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.06■□□□□ 0.16
P01852 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.06■□□□□ 0.16
P01852 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
P01852 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.06■□□□□ 0.16
P01852 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.06■□□□□ 0.16
P01852 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P01852 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
P01852 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01852 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P01852 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01852 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01852 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
P01852 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P01852 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
P01852 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms