Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.01□□□□□ -0.17
P01643 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Gm13401-201ENSMUST00000117074 291 ntBASIC14.01□□□□□ -0.17
P01643 Gm27463-201ENSMUST00000183569 57 ntBASIC14.01□□□□□ -0.17
P01643 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.01□□□□□ -0.17
P01643 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
P01643 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
P01643 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
P01643 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.01□□□□□ -0.17
P01643 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01643 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14□□□□□ -0.17
P01643 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
P01643 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14□□□□□ -0.17
P01643 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
P01643 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P01643 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P01643 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14□□□□□ -0.17
P01643 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14□□□□□ -0.17
P01643 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P01643 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14□□□□□ -0.17
P01643 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
P01643 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P01643 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P01643 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.99□□□□□ -0.17
P01643 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
P01643 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
P01643 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P01643 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
P01643 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.99□□□□□ -0.17
P01643 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.99□□□□□ -0.17
P01643 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
P01643 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
P01643 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.99□□□□□ -0.17
P01643 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.99□□□□□ -0.17
P01643 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01643 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.98□□□□□ -0.17
P01643 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.98□□□□□ -0.17
P01643 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.98□□□□□ -0.17
P01643 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.98□□□□□ -0.17
P01643 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.98□□□□□ -0.17
P01643 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
P01643 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P01643 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.98□□□□□ -0.17
P01643 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms