Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.14■□□□□ 0.49
Syn1O88935 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Syn1O88935 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.13■□□□□ 0.49
Syn1O88935 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Syn1O88935 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Syn1O88935 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.13■□□□□ 0.49
Syn1O88935 Gm6623-201ENSMUST00000173570 544 ntBASIC18.13■□□□□ 0.49
Syn1O88935 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Syn1O88935 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.13■□□□□ 0.49
Syn1O88935 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syn1O88935 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
Syn1O88935 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.12■□□□□ 0.49
Syn1O88935 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.12■□□□□ 0.49
Syn1O88935 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syn1O88935 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.12■□□□□ 0.49
Syn1O88935 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.12■□□□□ 0.49
Syn1O88935 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Syn1O88935 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Syn1O88935 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syn1O88935 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.1■□□□□ 0.49
Syn1O88935 Gm18733-201ENSMUST00000173950 856 ntBASIC18.1■□□□□ 0.49
Syn1O88935 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Syn1O88935 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syn1O88935 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Iqck-206ENSMUST00000208658 2891 ntBASIC18.09■□□□□ 0.49
Syn1O88935 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.09■□□□□ 0.49
Syn1O88935 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.09■□□□□ 0.49
Syn1O88935 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syn1O88935 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Syn1O88935 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syn1O88935 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syn1O88935 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.08■□□□□ 0.48
Syn1O88935 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.08■□□□□ 0.48
Syn1O88935 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Syn1O88935 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Syn1O88935 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.08■□□□□ 0.48
Syn1O88935 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syn1O88935 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Syn1O88935 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Syn1O88935 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Syn1O88935 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Syn1O88935 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Syn1O88935 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.07■□□□□ 0.48
Syn1O88935 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syn1O88935 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.07■□□□□ 0.48
Syn1O88935 Gm18206-201ENSMUST00000207027 926 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms