Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.78■□□□□ 0.12
Hdac3O88895 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hdac3O88895 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.77■□□□□ 0.12
Hdac3O88895 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.77■□□□□ 0.12
Hdac3O88895 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.77■□□□□ 0.12
Hdac3O88895 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Hdac3O88895 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.77■□□□□ 0.11
Hdac3O88895 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Hdac3O88895 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hdac3O88895 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.76■□□□□ 0.11
Hdac3O88895 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Hdac3O88895 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.76■□□□□ 0.11
Hdac3O88895 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.76■□□□□ 0.11
Hdac3O88895 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Hdac3O88895 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hdac3O88895 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.75■□□□□ 0.11
Hdac3O88895 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.75■□□□□ 0.11
Hdac3O88895 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hdac3O88895 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hdac3O88895 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.75■□□□□ 0.11
Hdac3O88895 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hdac3O88895 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hdac3O88895 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hdac3O88895 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hdac3O88895 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hdac3O88895 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.74■□□□□ 0.11
Hdac3O88895 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.74■□□□□ 0.11
Hdac3O88895 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.74■□□□□ 0.11
Hdac3O88895 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hdac3O88895 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hdac3O88895 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms