Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CcnkO88874 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcnkO88874 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.69■□□□□ 0.1
CcnkO88874 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.69■□□□□ 0.1
CcnkO88874 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CcnkO88874 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CcnkO88874 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Gm18284-201ENSMUST00000172604 624 ntBASIC15.69■□□□□ 0.1
CcnkO88874 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.69■□□□□ 0.1
CcnkO88874 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.69■□□□□ 0.1
CcnkO88874 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.69■□□□□ 0.1
CcnkO88874 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.69■□□□□ 0.1
CcnkO88874 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.69■□□□□ 0.1
CcnkO88874 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
CcnkO88874 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcnkO88874 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.68■□□□□ 0.1
CcnkO88874 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.68■□□□□ 0.1
CcnkO88874 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
CcnkO88874 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
CcnkO88874 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.68■□□□□ 0.1
CcnkO88874 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CcnkO88874 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcnkO88874 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.67■□□□□ 0.1
CcnkO88874 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.67■□□□□ 0.1
CcnkO88874 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcnkO88874 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CcnkO88874 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.66■□□□□ 0.1
CcnkO88874 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CcnkO88874 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CcnkO88874 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CcnkO88874 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.66■□□□□ 0.1
CcnkO88874 Gm42642-201ENSMUST00000200683 355 ntBASIC15.66■□□□□ 0.1
CcnkO88874 Gm5874-201ENSMUST00000096101 508 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms