Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.91■□□□□ 0.3
Hcn3O88705 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.91■□□□□ 0.3
Hcn3O88705 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.91■□□□□ 0.3
Hcn3O88705 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.91■□□□□ 0.3
Hcn3O88705 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Hcn3O88705 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn3O88705 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.9■□□□□ 0.3
Hcn3O88705 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Hcn3O88705 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Hcn3O88705 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
Hcn3O88705 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.9■□□□□ 0.3
Hcn3O88705 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn3O88705 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hcn3O88705 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hcn3O88705 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Reep4-203ENSMUST00000226563 1444 ntBASIC16.89■□□□□ 0.29
Hcn3O88705 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Idnk-204ENSMUST00000226010 1898 ntBASIC16.89■□□□□ 0.29
Hcn3O88705 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.89■□□□□ 0.29
Hcn3O88705 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Hcn3O88705 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcn3O88705 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.88■□□□□ 0.29
Hcn3O88705 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Gm42778-201ENSMUST00000199644 553 ntBASIC16.88■□□□□ 0.29
Hcn3O88705 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hcn3O88705 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hcn3O88705 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hcn3O88705 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hcn3O88705 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.87■□□□□ 0.29
Hcn3O88705 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hcn3O88705 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.87■□□□□ 0.29
Hcn3O88705 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.87■□□□□ 0.29
Hcn3O88705 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
Hcn3O88705 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.87■□□□□ 0.29
Hcn3O88705 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.87■□□□□ 0.29
Hcn3O88705 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hcn3O88705 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.86■□□□□ 0.29
Hcn3O88705 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
Hcn3O88705 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.86■□□□□ 0.29
Hcn3O88705 Gm8495-201ENSMUST00000188740 694 ntBASIC16.86■□□□□ 0.29
Hcn3O88705 Gm38205-201ENSMUST00000192243 258 ntBASIC16.86■□□□□ 0.29
Hcn3O88705 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hcn3O88705 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hcn3O88705 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms